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CD36_08240 protein transport component, putative [ Candida dubliniensis CD36 ]

Gene ID: 8045015, updated on 17-May-2024

Summary

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Gene symbol
CD36_08240
Gene description
protein transport component, putative
Primary source
FungiDB:CD36_08240
Locus tag
CD36_08240
See related
VEuPathDB:CD36_08240
Gene type
protein coding
RNA name
protein transport component, putative
RefSeq status
PROVISIONAL
Organism
Candida dubliniensis CD36 (strain: CD36)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CD36_08240 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_012860.1 (1944095..1946887, complement)

Chromosome 1 - NC_012860.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene oligomeric Golgi complex subunit, putative Neighboring gene carrier protein, mitochondrial precursor, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans. Jackson AP, et al. Genome Res, 2009 Dec. PMID 19745113, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
protein transport component, putative
vesicle coat component, putative
XP_002417470.1
  • Similar to C. albicans SEC24;
    Similar to S. cerevisiae SEC24

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012860.1 Reference assembly

    Range
    1944095..1946887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002417425.1 → XP_002417470.1  protein transport component, putative [Candida dubliniensis CD36]

    See identical proteins and their annotated locations for XP_002417470.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B9W8Q0
    Conserved Domains (5) summary
    pfam00626
    Location:783 → 849
    Gelsolin; Gelsolin repeat
    pfam04810
    Location:229 → 266
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:646 → 743
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:548 → 631
    Sec23_BS; Sec23/Sec24 beta-sandwich domain
    cl00057
    Location:303 → 547
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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