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LOC8043147 AT-rich interactive domain-containing protein 2 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8043147, updated on 26-Mar-2024

Summary

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Gene symbol
LOC8043147
Gene description
AT-rich interactive domain-containing protein 2
See related
VectorBase:ISCP_034075; EnsemblRapid:LOC8043147
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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See LOC8043147 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609879.1 (91384615..91468456)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388423.1 (525384..608823, complement)

NW_024609879.1Genomic Context describing neighboring genes Neighboring gene protein GUCD1 Neighboring gene protein GUCD1 Neighboring gene uncharacterized LOC120844933 Neighboring gene peroxynitrite isomerase THAP4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF superfamily-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609879.1 Reference ASM1692078v2

    Range
    91384615..91468456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029983890.4 → XP_029839750.2  LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2

    Related
    XP_029839750.2, XM_029983890.4
    Conserved Domains (4) summary
    PHA03247
    Location:684 → 1158
    PHA03247; large tegument protein UL36; Provisional
    COG3147
    Location:631 → 711
    DedD; Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning]
    PRK12323
    Location:675 → 911
    PRK12323; DNA polymerase III subunit gamma/tau
    cl28902
    Location:14 → 101
    ARID; ARID/BRIGHT DNA binding domain family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials