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LOC8040067 lysosomal alpha-mannosidase [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8040067, updated on 26-Mar-2024

Summary

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Gene symbol
LOC8040067
Gene description
lysosomal alpha-mannosidase
See related
VectorBase:ISCP_014318; EnsemblRapid:LOC8040067
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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See LOC8040067 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609868.1 (3552867..3597128)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024390102.1 (435404..479650, complement)

NW_024609868.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S5 Neighboring gene mitochondrial ribosomal protein L3 Neighboring gene lysosomal alpha-mannosidase Neighboring gene uncharacterized LOC121837019 Neighboring gene uncharacterized LOC8026391

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-mannosidase
Names
putative lysosomal alpha-mannosidase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609868.1 Reference ASM1692078v2

    Range
    3552867..3597128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029985099.4 → XP_029840959.3  lysosomal alpha-mannosidase

    Related
    XP_029840959.3, XM_029985099.4
    Conserved Domains (2) summary
    PLN02701
    Location:48 → 891
    PLN02701; alpha-mannosidase
    cl15692
    Location:48 → 313
    CE4_SF; Catalytic NodB homology domain of the carbohydrate esterase 4 superfamily
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials