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LOC8036646 acyl-CoA Delta-9 desaturase [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8036646, updated on 31-Jul-2024

Summary

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Gene symbol
LOC8036646
Gene description
acyl-CoA Delta-9 desaturase
See related
VectorBase:ISCP_027007; EnsemblRapid:LOC8036646
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609868.1 (33820740..33839086, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388002.1 (1008596..1023566)

NW_024609868.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA Delta-9 desaturase Neighboring gene stearoyl-CoA desaturase 5 Neighboring gene acyl-CoA Delta-9 desaturase Neighboring gene uncharacterized LOC120840686

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems. Egekwu N, et al. PLoS One, 2014. PMID 25075967, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acyl-CoA Delta-9 desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609868.1 Reference ASM1692078v2

    Range
    33820740..33839086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042292697.1 → XP_042148631.1  LOW QUALITY PROTEIN: acyl-CoA Delta-9 desaturase

    UniProtKB/TrEMBL
    B7Q6K5
    Related
    XP_042148631.1, XM_042292697.1
    Conserved Domains (1) summary
    cd03505
    Location:34 → 274
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

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Research Materials