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LOC8033685 protein KRI1 homolog [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8033685, updated on 10-May-2024

Summary

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Gene symbol
LOC8033685
Gene description
protein KRI1 homolog
See related
VectorBase:ISCP_000132; EnsemblRapid:LOC8033685
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Orthologs
fruit fly all
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Genomic context

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See LOC8033685 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609838.1 (10009083..10028556, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024389075.1 (601650..621128)

NW_024609838.1Genomic Context describing neighboring genes Neighboring gene U5 spliceosomal RNA Neighboring gene L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase Neighboring gene cAMP-specific 3',5'-cyclic phosphodiesterase 4C Neighboring gene uncharacterized LOC115316980

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein KRI1 homolog
Names
putative krr1-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609838.1 Reference ASM1692078v2

    Range
    10009083..10028556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029970567.4 → XP_029826427.2  protein KRI1 homolog

    UniProtKB/TrEMBL
    A0A4D5RHB4
    Related
    XP_029826427.2, XM_029970567.4
Nucleotide Protein
Heading Accession and Version

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