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LOC8032110 SH3 domain-binding protein 5-like [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8032110, updated on 26-Mar-2024

Summary

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Gene symbol
LOC8032110
Gene description
SH3 domain-binding protein 5-like
See related
VectorBase:ISCP_007440; EnsemblRapid:LOC8032110
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
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Genomic context

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See LOC8032110 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609835.1 (175675192..175725923)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388520.1 (289078..337811, complement)

NW_024609835.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115320472 Neighboring gene uncharacterized LOC121047949 Neighboring gene PTB domain-containing adapter protein ced-6 Neighboring gene keratin-associated protein 9-1-like Neighboring gene keratin-associated protein 10-10-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems. Egekwu N, et al. PLoS One, 2014. PMID 25075967, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 domain-binding protein 5-like
Names
putative btk-associated sh3-domain binding protein sab

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609835.1 Reference ASM1692078v2

    Range
    175675192..175725923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029980657.4 → XP_029836517.3  SH3 domain-binding protein 5-like isoform X1

    UniProtKB/TrEMBL
    A0A4D5RLU1
    Related
    XP_029836517.3, XM_029980657.4
    Conserved Domains (1) summary
    COG1196
    Location:21 → 261
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_042290464.1 → XP_042146398.1  SH3 domain-binding protein 5-like isoform X2

    UniProtKB/TrEMBL
    B7PVU9
    Related
    XP_042146398.1, XM_042290464.1
Nucleotide Protein
Heading Accession and Version

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Research Materials