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TEX38 testis expressed 38 [ Bos taurus (cattle) ]

Gene ID: 784640, updated on 6-Jun-2024

Summary

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Official Symbol
TEX38provided by VGNC
Official Full Name
testis expressed 38provided by VGNC
Primary source
VGNC:VGNC:55690
See related
BGD:BT17915; Ensembl:ENSBTAG00000046812
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
ATPAF1-AS1; C3H1orf223
Orthologs
human mouse all
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Genomic context

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See TEX38 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (99461126..99466319, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101907070 Neighboring gene EF-hand calcium binding domain 14 Neighboring gene ATP synthase mitochondrial F1 complex assembly factor 1 Neighboring gene small nucleolar RNA U2-19 Neighboring gene small nucleolar RNA U2-30

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
testis-expressed sequence 38 protein; testis-expressed protein 38
Names
ATPAF1 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    99461126..99466319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059885149.1 → XP_059741132.1  testis-expressed protein 38 isoform X2

    UniProtKB/TrEMBL
    A0AAA9S1U1
    Related
    ENSBTAP00000087880.1, ENSBTAT00000112257.1

  2. XM_015466671.3 → XP_015322157.2  testis-expressed protein 38 isoform X1

    UniProtKB/TrEMBL
    G3MZX3
    Conserved Domains (1) summary
    pfam15834
    Location:13 → 214
    THEG4; Testis highly expressed protein 4
Nucleotide Protein Strain
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