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cluap1.L clusterin associated protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 779379, updated on 11-Apr-2024

Summary

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Official Symbol
cluap1.L
Official Full Name
clusterin associated protein 1 L homeolog
Primary source
Xenbase:XB-GENE-5734309
Locus tag
XELAEV_18045442mg
See related
EnsemblRapid:ENSXLAG00005019603
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
qilin; cluap1
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Genomic context

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Location:
chromosome: 9_10L
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (116517990..116556994)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (105916260..105955456)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SAM domain-containing protein 3 Neighboring gene glucagon receptor Neighboring gene NLR family, CARD domain containing 3 L homeolog Neighboring gene SLX4 structure-specific endonuclease subunit L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC99254

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within cell projection organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cilium assembly IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in centrosome IEA
Inferred from Electronic Annotation
more info
  
located_in cilium IEA
Inferred from Electronic Annotation
more info
  
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
clusterin-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096997.1 → NP_001090466.1  clusterin-associated protein 1

    See identical proteins and their annotated locations for NP_001090466.1

    Status: PROVISIONAL

    Source sequence(s)
    BC087440
    UniProtKB/TrEMBL
    Q5PPY4
    Related
    ENSXLAP00005057554.1, ENSXLAT00005058907.1
    Conserved Domains (1) summary
    cl12013
    Location:13 → 68
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    116517990..116556994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018234654.2 → XP_018090143.1  clusterin-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1L8EYI0, A0A974H499
    Related
    ENSXLAP00005057618.1, ENSXLAT00005058972.1

  2. XM_018234655.2 → XP_018090144.1  clusterin-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8J0TTQ2
    Related
    ENSXLAP00005057612.1, ENSXLAT00005058966.1

  3. XM_041575792.1 → XP_041431726.1  clusterin-associated protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8J1LRL9
    Related
    ENSXLAP00005057560.1, ENSXLAT00005058913.1
    Conserved Domains (1) summary
    COG1196
    Location:4 → 162
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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