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LP4 low molecular lipoprotein 30K pBmHPC-21 [ Bombyx mori (domestic silkworm) ]

Gene ID: 778471, updated on 9-Feb-2024

Summary

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Gene symbol
LP4
Gene description
low molecular lipoprotein 30K pBmHPC-21
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Also known as
Lp; 21G1; C-21; Lp-c21; Bm30K-6
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Genomic context

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See LP4 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 20 NC_085126.1 (3325868..3327810, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 20 NC_051377.1 (3315866..3317799, complement)

Chromosome 20 - NC_085126.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 52 Neighboring gene uncharacterized LOC134200730 Neighboring gene low molecular mass 30 kDa lipoprotein 19G1-like Neighboring gene low molecular lipoprotein 30K pBmHPC-19 Neighboring gene low molecular lipoprotein 30K pBmHPC-6 Neighboring gene microRNA mir-3344

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete nucleotide sequences of major plasma protein genes of Bombyx mori. Mori S, et al. Biochim Biophys Acta, 1991 Aug 27. PMID 1883839
  2. Structures and organization of major plasma protein genes of the silkworm Bombyx mori. Mori S, et al. J Mol Biol, 1991 Mar 5. PMID 2002509
  3. Structures and expression of mRNAs coding for major plasma proteins of Bombyx mori. Sakai N, et al. Biochim Biophys Acta, 1988 Feb 28. PMID 3342240
  4. Identification and Characterization of 30 K Protein Genes Found in Bombyx mori (Lepidoptera: Bombycidae) Transcriptome. Shi XF, et al. J Insect Sci, 2015. PMID 26078299, Free PMC Article
  5. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low molecular mass 30 kDa lipoprotein 21G1
Names
30 KDa lipoprotein 6
30 kDa lipoprotein 21G1
30K protein 6
Low molecular mass lipoprotein 4
Low molecular mass lipoprotein PBMHPC-21
bmlp4
low molecular 30 kDa lipoprotein PBMHPC-21

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101729.1 → NP_001095199.1  low molecular mass 30 kDa lipoprotein 21G1 precursor

    See identical proteins and their annotated locations for NP_001095199.1

    Status: PROVISIONAL

    Source sequence(s)
    X07555
    UniProtKB/Swiss-Prot
    P09337
    Conserved Domains (1) summary
    pfam03260
    Location:8 → 242
    Lipoprotein_11; Lepidopteran low molecular weight (30 kD) lipoprotein

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085126.1 Reference ASM3026992v2 Primary Assembly

    Range
    3325868..3327810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012695085.4 → XP_012550539.1  low molecular mass 30 kDa lipoprotein 21G1 isoform X1

    See identical proteins and their annotated locations for XP_012550539.1

    UniProtKB/Swiss-Prot
    H9J4F5, Q00801
    Conserved Domains (1) summary
    pfam03260
    Location:8 → 262
    Lipoprotein_11; Lepidopteran low molecular weight (30 kD) lipoprotein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P09337.1 GenPept UniProtKB/Swiss-Prot:P09337
Q00801.2 GenPept UniProtKB/Swiss-Prot:Q00801

Gene LinkOut

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