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MYB183 MYB transcription factor MYB183 [ Glycine max (soybean) ]

Gene ID: 778056, updated on 7-Dec-2023

Summary

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Gene symbol
MYB183
Gene description
MYB transcription factor MYB183
Locus tag
GLYMA_06G187600v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See MYB183 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 6 NC_038242.2 (16331567..16334304)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 6 NC_038242.1 (16379181..16381918)

Chromosome 6 - NC_038242.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102666040 Neighboring gene TORTIFOLIA1-like protein 3 Neighboring gene uncharacterized LOC106799015 Neighboring gene uncharacterized LOC102666553

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to auxin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ethylene IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to gibberellin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MYB transcription factor MYB183

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001249070.1 → NP_001235999.1  MYB transcription factor MYB183

    See identical proteins and their annotated locations for NP_001235999.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ822920
    UniProtKB/TrEMBL
    Q0PJI2
    Conserved Domains (2) summary
    COG5114
    Location:82 → 181
    COG5114; Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]
    cl21498
    Location:77 → 126
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038242.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    16331567..16334304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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