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fhdc3 FH2 domain containing 3 [ Danio rerio (zebrafish) ]

Gene ID: 777608, updated on 10-Jun-2024

Summary

Official Symbol
fhdc3provided by ZNC
Official Full Name
FH2 domain containing 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-061103-76
See related
Ensembl:ENSDARG00000069129 AllianceGenome:ZFIN:ZDB-GENE-061103-76
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:153126
Summary
Predicted to enable protein domain specific binding activity. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See fhdc3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (26190807..26202538, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (26229094..26240825, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 47 Neighboring gene tripartite motif containing 3b Neighboring gene ADP-ribosylation factor interacting protein 2b Neighboring gene dachsous cadherin-related 1b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077716.2NP_001071184.2  FH2 domain containing 3

    Status: VALIDATED

    Source sequence(s)
    BX530069
    Related
    ENSDARP00000114515.1, ENSDART00000136393.2

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    26190807..26202538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394786.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    35997..47728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)