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PHF19 PHD finger protein 19 [ Gallus gallus (chicken) ]

Gene ID: 772213, updated on 17-Aug-2024

Summary

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Official Symbol
PHF19provided by CGNC
Official Full Name
PHD finger protein 19provided by CGNC
Primary source
CGNC:57369
See related
Ensembl:ENSGALG00010027530
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (8895100..8902438, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (8305615..8312257, complement)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, non-ATPase 5 Neighboring gene cutA divalent cation tolerance like Neighboring gene TNF receptor associated factor 1 Neighboring gene complement component 5 Neighboring gene centriolin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: PHD finger protein 19; PHD finger protein 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    8895100..8902438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015279817.4 → XP_015135303.2  PHD finger protein 19 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9G3
    Conserved Domains (3) summary
    smart00333
    Location:26 → 74
    TUDOR; Tudor domain
    cd15581
    Location:184 → 235
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
    cl22851
    Location:85 → 137
    PHD_SF; PHD finger superfamily

  2. XM_015279816.4 → XP_015135302.2  PHD finger protein 19 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9G3
    Related
    ENSGALP00010040823.1, ENSGALT00010066678.1
    Conserved Domains (3) summary
    smart00333
    Location:26 → 74
    TUDOR; Tudor domain
    cd15581
    Location:184 → 235
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
    cl22851
    Location:85 → 137
    PHD_SF; PHD finger superfamily

  3. XM_015279818.4 → XP_015135304.2  PHD finger protein 19 isoform X2

    UniProtKB/TrEMBL
    A0A8V1A9G3
    Conserved Domains (3) summary
    smart00333
    Location:26 → 74
    TUDOR; Tudor domain
    cd15581
    Location:184 → 235
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
    cl22851
    Location:85 → 137
    PHD_SF; PHD finger superfamily

  4. XM_025141497.3 → XP_024997265.2  PHD finger protein 19 isoform X1

    Conserved Domains (3) summary
    smart00333
    Location:133 → 181
    TUDOR; Tudor domain
    cd15579
    Location:192 → 244
    PHD1_PHF19; PHD finger 1 found in PHD finger protein 19 (PHF19)
    cd15581
    Location:291 → 342
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    8305615..8312257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685475.2 → XP_040541409.1  LOW QUALITY PROTEIN: PHD finger protein 19 isoform X1

    Conserved Domains (3) summary
    smart00333
    Location:133 → 181
    TUDOR; Tudor domain
    cd15579
    Location:192 → 244
    PHD1_PHF19; PHD finger 1 found in PHD finger protein 19 (PHF19)
    cd15581
    Location:291 → 342
    PHD2_PHF19; PHD finger 2 found in PHD finger protein 19 (PHF19)
Nucleotide Protein
Heading Accession and Version

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