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TNFRSF13B TNF receptor superfamily member 13B [ Gallus gallus (chicken) ]

Gene ID: 770275, updated on 6-Jun-2024

Summary

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Symbol
TNFRSF13Bprovided by CGNC
Full Name
TNF receptor superfamily member 13Bprovided by CGNC
Primary source
CGNC:17053
See related
Ensembl:ENSGALG00010021671
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TNFRSF13B in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4659263..4663866, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4653917..4658504, complement)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC416500 Neighboring gene ubiquitin specific peptidase 22 Neighboring gene myosin phosphatase Rho interacting protein Neighboring gene phospholipase D family member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The BAFF-Interacting receptors of chickens. Reddy SK, et al. Dev Comp Immunol, 2008. PMID 18395254

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 13B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097537.1 → NP_001091006.1  tumor necrosis factor receptor superfamily member 13B

    See identical proteins and their annotated locations for NP_001091006.1

    Status: PROVISIONAL

    Source sequence(s)
    AM492777
    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912
    Conserved Domains (2) summary
    cd00185
    Location:14 → 66
    TNFRSF; CRD1 [structural motif]
    cl22855
    Location:14 → 208
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4659263..4663866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015294252.4 → XP_015149738.2  tumor necrosis factor receptor superfamily member 13B isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912
    Conserved Domains (2) summary
    cd00185
    Location:14 → 66
    TNFRSF; CRD1 [structural motif]
    cl22855
    Location:14 → 208
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

  2. XM_015294251.4 → XP_015149737.2  tumor necrosis factor receptor superfamily member 13B isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912
    Related
    ENSGALP00010031547.1, ENSGALT00010052641.1
    Conserved Domains (2) summary
    cd00185
    Location:14 → 66
    TNFRSF; CRD1 [structural motif]
    cl22855
    Location:14 → 208
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4653917..4658504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927558.1 → XP_046783514.1  tumor necrosis factor receptor superfamily member 13B isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912

  2. XM_046927556.1 → XP_046783512.1  tumor necrosis factor receptor superfamily member 13B isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912

  3. XM_046927557.1 → XP_046783513.1  tumor necrosis factor receptor superfamily member 13B isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZL79, A4Q912
Nucleotide Protein Strain
Heading Accession and Version

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