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FBLIM1 filamin binding LIM protein 1 [ Bos taurus (domestic cattle) ]

Gene ID: 767833, updated on 18-Aug-2024

Summary

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Official Symbol
FBLIM1provided by VGNC
Official Full Name
filamin binding LIM protein 1provided by VGNC
Primary source
VGNC:VGNC:28880
See related
BGD:BT28605; Ensembl:ENSBTAG00000018725
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (51777670..51805327, complement)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene multiple coagulation factor deficiency protein 2 homolog Neighboring gene dehydrodolichyl diphosphate synthase complex subunit NUS1-like Neighboring gene transmembrane protein 82 Neighboring gene uncharacterized LOC112441770 Neighboring gene solute carrier family 25 member 34

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC138936

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables filamin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-binding LIM protein 1
Names
CSX-associated LIM
FBLP-1
migfilin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076955.1 → NP_001070423.1  filamin-binding LIM protein 1

    See identical proteins and their annotated locations for NP_001070423.1

    Status: PROVISIONAL

    Source sequence(s)
    BC116079
    UniProtKB/Swiss-Prot
    Q1JQB5
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    51777670..51805327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005217137.5 → XP_005217194.1  filamin-binding LIM protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005217194.1

    UniProtKB/Swiss-Prot
    Q1JQB5
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  2. XM_005217136.5 → XP_005217193.1  filamin-binding LIM protein 1 isoform X2

    See identical proteins and their annotated locations for XP_005217193.1

    UniProtKB/Swiss-Prot
    Q1JQB5
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  3. XM_024976527.2 → XP_024832295.1  filamin-binding LIM protein 1 isoform X2

    UniProtKB/Swiss-Prot
    Q1JQB5
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  4. XM_024976526.2 → XP_024832294.1  filamin-binding LIM protein 1 isoform X2

    UniProtKB/Swiss-Prot
    Q1JQB5
    Conserved Domains (3) summary
    cd09372
    Location:248 → 300
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:308 → 369
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    cl26519
    Location:15 → 56
    GalKase_gal_bdg; Galactokinase galactose-binding signature

  5. XM_005217135.5 → XP_005217192.1  filamin-binding LIM protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAF6Z5Y5
    Related
    ENSBTAP00000024926.4, ENSBTAT00000024926.5
    Conserved Domains (2) summary
    cd09372
    Location:275 → 327
    LIM2_FBLP-1; The second LIM domain of the filamin-binding LIM protein-1 (FBLP-1)
    cl02475
    Location:335 → 396
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1JQB5.1 GenPept UniProtKB/Swiss-Prot:Q1JQB5

Gene LinkOut

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