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BANF1 BAF nuclear assembly factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 746065, updated on 17-Aug-2024

Summary

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Official Symbol
BANF1provided by VGNC
Official Full Name
BAF nuclear assembly factor 1provided by VGNC
Primary source
VGNC:VGNC:10581
Locus tag
CK820_G0033905
See related
Ensembl:ENSPTRG00000045262
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (68332444..68334215)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (67437851..67439616)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene testis specific 10 interacting protein Neighboring gene spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP Neighboring gene eukaryotic translation initiation factor 1A domain containing Neighboring gene cystatin E/M Neighboring gene cation channel sperm associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
barrier-to-autointegration factor
Names
barrier to autointegration factor 1
barrier-to-autointegration factor pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    68332444..68334215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016921282.3 → XP_016776771.1  barrier-to-autointegration factor

    UniProtKB/TrEMBL
    A0A2J8QBM2, A0A6D2WCI0, K7DIQ8
    Conserved Domains (1) summary
    pfam02961
    Location:1 → 86
    BAF; Barrier to autointegration factor

  2. XM_016921280.3 → XP_016776769.1  barrier-to-autointegration factor

    UniProtKB/TrEMBL
    A0A2J8QBM2, A0A6D2WCI0, K7DIQ8
    Related
    ENSPTRP00000079424.1
    Conserved Domains (1) summary
    pfam02961
    Location:1 → 86
    BAF; Barrier to autointegration factor

  3. XM_016921281.2 → XP_016776770.1  barrier-to-autointegration factor

    UniProtKB/TrEMBL
    A0A2J8QBM2, A0A6D2WCI0, K7DIQ8
    Conserved Domains (1) summary
    pfam02961
    Location:1 → 86
    BAF; Barrier to autointegration factor

  4. XM_063783107.1 → XP_063639177.1  barrier-to-autointegration factor

    UniProtKB/TrEMBL
    A0A2J8QBM2, A0A6D2WCI0, K7DIQ8
Nucleotide Protein
Heading Accession and Version

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