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THAPSDRAFT_5046 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7448472, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_5046
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_5046
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_012068.1 (246432..247655, complement)

Chromosome 5 - NC_012068.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene amino acid/polyamine transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012068.1 Reference assembly

    Range
    246432..247655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002290489.1 → XP_002290525.1  predicted protein [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002290525.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8C1T8
    Conserved Domains (1) summary
    cl00281
    Location:72 → 405
    metallo-dependent_hydrolases; Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a ...
Nucleotide Protein
Heading Accession and Version

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