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PDT1 Phospholipid:diacylglycerol acyltransferase [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7445508, updated on 21-Dec-2023

Summary

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Gene symbol
PDT1
Gene description
Phospholipid:diacylglycerol acyltransferase
Locus tag
THAPSDRAFT_261132
Gene type
protein coding
RNA name
Phospholipid:diacylglycerol acyltransferase
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_012064.1 (2630161..2631941)

Chromosome 1 - NC_012064.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ABC transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012064.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Phospholipid:diacylglycerol acyltransferase
XP_002286433.1
  • [FUNCTION] Triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid. [CATALYTIC ACTIVITY] Phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012064.1 Reference assembly

    Range
    2630161..2631941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002286397.1 → XP_002286433.1  Phospholipid:diacylglycerol acyltransferase, partial [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002286433.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BS64
    Conserved Domains (1) summary
    cl21494
    Location:32 → 454
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
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