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RL8 RL8, ribosomal protein 8 [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7441804, updated on 21-Dec-2023

Summary

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Gene symbol
RL8
Gene description
RL8, ribosomal protein 8
Locus tag
THAPSDRAFT_264201
Gene type
protein coding
RNA name
RL8, ribosomal protein 8
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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See RL8 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Sequence:
Chromosome: 14; NC_012077.1 (738896..740120)

Chromosome 14 - NC_012077.1Genomic Context describing neighboring genes Neighboring gene pre-mrna splicing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012077.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
RL8, ribosomal protein 8
XP_002293798.1
  • RL8, ribosomal protein 8, 60S large ribosomal subunit, nuclear, translation, protein biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012077.1 Reference assembly

    Range
    738896..740120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002293762.2 → XP_002293798.1  RL8, ribosomal protein 8 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002293798.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8CCN2
    Conserved Domains (3) summary
    PTZ00180
    Location:1 → 256
    PTZ00180; 60S ribosomal protein L8; Provisional
    pfam00181
    Location:11 → 90
    Ribosomal_L2; Ribosomal Proteins L2, RNA binding domain
    pfam03947
    Location:99 → 226
    Ribosomal_L2_C; Ribosomal Proteins L2, C-terminal domain
Nucleotide Protein
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