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DEFB131A defensin beta 131A [ Pan troglodytes (chimpanzee) ]

Gene ID: 743927, updated on 13-Apr-2024

Summary

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Gene symbol
DEFB131A
Gene description
defensin beta 131A
Locus tag
CK820_G0040260
See related
Ensembl:ENSPTRG00000015911
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
DEFB131
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Genomic context

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Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (18052692..18058901, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (21450426..21456639, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene olfactory receptor 7E24-like Neighboring gene putative gustatory receptor clone PTE01 Neighboring gene defensin, beta 108, pseudogene Neighboring gene zinc finger protein 705D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. Patil AA, et al. Physiol Genomics, 2005 Sep 21. PMID 16033865

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-defensin 131A
Names
defensin beta 131

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001129779.2 → NP_001123251.2  beta-defensin 131A precursor

    Status: VALIDATED

    Source sequence(s)
    JAQQLN020000007
    UniProtKB/TrEMBL
    A0A2I3T8G2, A0A2J8Q059, A0A2J8Q9H5, A0A6D2YBQ3
    Related
    ENSPTRP00000027407.1, ENSPTRT00000029705.2
    Conserved Domains (1) summary
    pfam13841
    Location:28 → 57
    Defensin_beta_2; Beta defensin

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    18052692..18058901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q30KJ8.1 GenPept UniProtKB/Swiss-Prot:Q30KJ8

Gene LinkOut

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