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PHOX2B paired like homeobox 2B [ Pan troglodytes (chimpanzee) ]

Gene ID: 739088, updated on 29-Mar-2024

Summary

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Official Symbol
PHOX2Bprovided by VGNC
Official Full Name
paired like homeobox 2Bprovided by VGNC
Primary source
VGNC:VGNC:7050
Locus tag
CK820_G0003704
See related
Ensembl:ENSPTRG00000016011
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PHOX2B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (42068246..42071315, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (42068219..42071288, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene ubiquitin C-terminal hydrolase L1 Neighboring gene LIM and calponin homology domains 1 Neighboring gene uncharacterized LOC104006031 Neighboring gene uncharacterized LOC134809826 Neighboring gene uncharacterized LOC134809825 Neighboring gene large ribosomal subunit protein eL21-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in enteric nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired mesoderm homeobox protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    42068246..42071315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001149518.5 → XP_001149518.1  paired mesoderm homeobox protein 2B

    See identical proteins and their annotated locations for XP_001149518.1

    UniProtKB/TrEMBL
    A0A2J8PGK2, A0A6D2XXP9, H2QPD7
    Related
    ENSPTRP00000027552.2
    Conserved Domains (1) summary
    pfam00046
    Location:102 → 155
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials