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DNAAF3 dynein axonemal assembly factor 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 735574, updated on 6-Jun-2024

Summary

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Official Symbol
DNAAF3provided by VGNC
Official Full Name
dynein axonemal assembly factor 3provided by VGNC
Primary source
VGNC:VGNC:13181
Locus tag
CK820_G0052463
See related
Ensembl:ENSPTRG00000011490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DNAAF3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (57968907..57977225, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (57968933..57977147, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene troponin T1, slow skeletal type Neighboring gene troponin I3, cardiac type Neighboring gene uncharacterized LOC129138107 Neighboring gene small nucleolar RNA U13 Neighboring gene synaptotagmin 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonemal dynein complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein axonemal assembly factor 3
Names
UPF0470 protein C19orf51 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280166.1 → NP_001267095.1  dynein axonemal assembly factor 3

    See identical proteins and their annotated locations for NP_001267095.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306620
    UniProtKB/TrEMBL
    A0A2J8IWZ1, G2HIQ6
    Conserved Domains (2) summary
    pfam14737
    Location:18 → 122
    DUF4470; Domain of unknown function (DUF4470)
    pfam14740
    Location:154 → 439
    DUF4471; Domain of unknown function (DUF4471)

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    57968907..57977225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063800355.1 → XP_063656425.1  dynein axonemal assembly factor 3 isoform X5

  2. XM_016934141.4 → XP_016789630.1  dynein axonemal assembly factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8IWZ1, A0A2J8IWZ4
    Conserved Domains (3) summary
    pfam14737
    Location:65 → 169
    DUF4470; Domain of unknown function (DUF4470)
    pfam14740
    Location:201 → 490
    DUF4471; Domain of unknown function (DUF4471)
    cl00232
    Location:481 → 578
    Ribosomal_L19e; Ribosomal protein L19e. L19e is found in the large ribosomal subunit of eukaryotes and archaea. L19e is distinct from the ribosomal subunit L19, which is found in prokaryotes. It consists of two small globular domains connected by an extended segment. ...

  3. XM_016934145.4 → XP_016789634.1  dynein axonemal assembly factor 3 isoform X4

    Conserved Domains (2) summary
    pfam14737
    Location:63 → 169
    DUF4470; Domain of unknown function (DUF4470)
    pfam14740
    Location:201 → 456
    DUF4471; Domain of unknown function (DUF4471)

  4. XM_063800350.1 → XP_063656420.1  dynein axonemal assembly factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A2J8IWZ1, A0A2J8IX05

  5. XM_063800352.1 → XP_063656422.1  dynein axonemal assembly factor 3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8IWZ1, G2HIQ6

  6. XM_063800357.1 → XP_063656427.1  dynein axonemal assembly factor 3 isoform X8

  7. XM_063800351.1 → XP_063656421.1  dynein axonemal assembly factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A2J8IWZ1, A0A2J8IX05

  8. XM_063800353.1 → XP_063656423.1  dynein axonemal assembly factor 3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8IWZ1, G2HIQ6

  9. XM_016934146.4 → XP_016789635.1  dynein axonemal assembly factor 3 isoform X6

    UniProtKB/TrEMBL
    A0A2J8IWZ2, A0A6D2XGR5, H2R408
    Related
    ENSPTRP00000046385.4
    Conserved Domains (2) summary
    pfam14737
    Location:23 → 68
    DUF4470; Domain of unknown function (DUF4470)
    pfam14740
    Location:100 → 389
    DUF4471; Domain of unknown function (DUF4471)

  10. XM_063800356.1 → XP_063656426.1  dynein axonemal assembly factor 3 isoform X7

Nucleotide Protein
Heading Accession and Version

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