gdpd1.L glycerophosphodiester phosphodiesterase domain containing 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gdpd1.L
Official Full Name: glycerophosphodiester phosphodiesterase domain containing 1 L homeolog
Primary source: Xenbase:XB-GENE-6254085
Locus tag: XELAEV_18001338mg
See related: EnsemblRapid:ENSXLAG00005024068
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gdpd1
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (135387740..135393136, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016694813.1 (967542..972938)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables lysophospholipase activity	IEA Inferred from Electronic Annotation more info
enables phosphoric diester hydrolase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within glycerophospholipid catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lipid metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: glycerophosphodiester phosphodiesterase domain containing 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096670.1 → NP_001090139.1 glycerophosphodiester phosphodiesterase domain containing 1 L homeolog

See identical proteins and their annotated locations for NP_001090139.1

Status: PROVISIONAL

Source sequence(s)

BC108563

UniProtKB/TrEMBL

Q32NM3

Related

ENSXLAP00005071324.1, ENSXLAT00005072871.1

Conserved Domains (2) summary

cd08612
Location:13 → 310

GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins

pfam03009
Location:44 → 301

GDPD; Glycerophosphoryl diester phosphodiesterase family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

135387740..135393136 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)