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eIF6 eukaryotic translation initiation factor 6 [ Bombyx mori (domestic silkworm) ]

Gene ID: 733105, updated on 15-May-2024

Summary

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Gene symbol
eIF6
Gene description
eukaryotic translation initiation factor 6
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
Orthologs
fruit fly all
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Genomic context

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See eIF6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 8 NC_085114.1 (15903921..15904929, complement)
103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 8 NC_051365.1 (15870337..15871345, complement)

Chromosome 8 - NC_085114.1Genomic Context describing neighboring genes Neighboring gene Ras-like protein A Neighboring gene WD repeat domain 24 Neighboring gene ubiquitin specific protease 30 Neighboring gene uncharacterized LOC101741100 Neighboring gene titin Neighboring gene uncharacterized LOC101741239

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
  2. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribosomal large subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in assembly of large subunit precursor of preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytosolic ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of 5.8S rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 6
NP_001040517.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001047052.1 → NP_001040517.1  eukaryotic translation initiation factor 6

    See identical proteins and their annotated locations for NP_001040517.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ443193
    UniProtKB/TrEMBL
    Q1HQ59
    Conserved Domains (1) summary
    PTZ00136
    Location:1 → 245
    PTZ00136; eukaryotic translation initiation factor 6-like protein; Provisional

RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085114.1 Reference ASM3026992v2 Primary Assembly

    Range
    15903921..15904929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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