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Tpi triose phosphate isomerase [ Apis mellifera (honey bee) ]

Gene ID: 726117, updated on 24-May-2024

Summary

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Gene symbol
Tpi
Gene description
triose phosphate isomerase
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Apis mellifera
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
Also known as
GB17473
Orthologs
fruit fly all
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Genomic context

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See Tpi in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
5
Annotation release Status Assembly LG Location
104 current Amel_HAv3.1 (GCF_003254395.2) LG16 NC_037653.1 (1223674..1226006)
103 previous assembly Amel_4.5 (GCF_000002195.4) LG16 NC_007085.3 (1821836..1824214, complement)

Linkage Group LG16 - NC_037653.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 Neighboring gene INO80 complex subunit C Neighboring gene uncharacterized LOC102654461 Neighboring gene mitochondrial ribosomal protein L20 Neighboring gene UTP3 small subunit processome component Sas10 Neighboring gene 10 kDa heat shock protein, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
  2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
  3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
  4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triose phosphate isomerase
Names
triosephoshpate isomerase
triosephosphate isomerase 1
NP_001090623.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097154.2 → NP_001090623.1  triose phosphate isomerase

    See identical proteins and their annotated locations for NP_001090623.1

    Status: PROVISIONAL

    Source sequence(s)
    EF493864
    UniProtKB/TrEMBL
    A0A7M6UUI7, A0A8B6WZ64, A0A8U1C2T8, A4ZXC4
    Conserved Domains (1) summary
    PTZ00333
    Location:1 → 245
    PTZ00333; triosephosphate isomerase; Provisional

RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Amel_HAv3.1 Primary Assembly

Genomic

  1. NC_037653.1 Reference Amel_HAv3.1 Primary Assembly

    Range
    1223674..1226006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials