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LOC719262 transcription factor Spi-B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719262, updated on 9-Nov-2023

Summary

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Gene symbol
LOC719262
Gene description
transcription factor Spi-B
Locus tag
EGK_10926
See related
Ensembl:ENSMMUG00000056332
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
SPIB; POLD1
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Genomic context

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See LOC719262 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
32
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (50291028..50336314)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (45747890..45793764)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114674080 Neighboring gene napsin-A Neighboring gene nuclear receptor subfamily 1 group H member 2 Neighboring gene myosin binding protein C2 Neighboring gene golgi associated RAB2 interactor 5A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication proofreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, gap-filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, DNA gap filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of delta DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase delta catalytic subunit; transcription factor Spi-B
Names
polymerase (DNA directed), delta 1, catalytic subunit 125kDa
XP_014980136.1
XP_014980138.1
XP_014980139.1
XP_028695278.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    50291028..50336314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028839445.1 → XP_028695278.1  DNA polymerase delta catalytic subunit isoform X2

    UniProtKB/TrEMBL
    F6ZNP5
    Conserved Domains (2) summary
    smart00413
    Location:1286 → 1374
    ETS; erythroblast transformation specific domain
    PTZ00166
    Location:115 → 1132
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_015124650.2 → XP_014980136.1  transcription factor Spi-B isoform X1

    UniProtKB/TrEMBL
    A0A5F8AMC5, A0A8J8YFI3, G7NLR6
    Related
    ENSMMUP00000078977.1, ENSMMUT00000102625.1
    Conserved Domains (1) summary
    smart00413
    Location:168 → 256
    ETS; erythroblast transformation specific domain

  3. XM_015124652.1 → XP_014980138.1  transcription factor Spi-B isoform X3

    Conserved Domains (1) summary
    smart00413
    Location:137 → 225
    ETS; erythroblast transformation specific domain

  4. XM_015124653.1 → XP_014980139.1  transcription factor Spi-B isoform X4

    UniProtKB/TrEMBL
    F7F0F3
    Conserved Domains (1) summary
    pfam00178
    Location:79 → 160
    Ets; Ets-domain
Nucleotide Protein
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