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AP5S1 adaptor related protein complex 5 subunit sigma 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718611, updated on 17-Aug-2024

Summary

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Official Symbol
AP5S1provided by VGNC
Official Full Name
adaptor related protein complex 5 subunit sigma 1provided by VGNC
Primary source
VGNC:VGNC:69837
See related
Ensembl:ENSMMUG00000057292
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
C20orf29
Orthologs
human mouse all
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Genomic context

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See AP5S1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (62659022..62665224, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (36681612..36687906)

Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 2 Neighboring gene microRNA mir-103-2 Neighboring gene mitochondrial antiviral signaling protein Neighboring gene cell division cycle 25B Neighboring gene centromere protein B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-type membrane coat adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-5 complex subunit sigma-1
Names
adaptor related protein complex 5 sigma 1 subunit
protein C20orf29

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194748.1 → NP_001181677.1  AP-5 complex subunit sigma-1

    See identical proteins and their annotated locations for NP_001181677.1

    Status: PROVISIONAL

    Source sequence(s)
    QNVO02000030
    UniProtKB/TrEMBL
    A0A5F7ZGM5, A0A8J8XMD8, G7N2V4, H9FWR2
    Related
    ENSMMUP00000068337.1, ENSMMUT00000099686.1
    Conserved Domains (1) summary
    pfam15001
    Location:1 → 194
    AP-5_subunit_s1; AP-5 complex subunit sigma-1

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041763.1 Reference Mmul_10 Primary Assembly

    Range
    62659022..62665224 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015149382.2 → XP_015004868.1  AP-5 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZGM5, A0A8J8XMD8, G7N2V4, H9FWR2
    Related
    ENSMMUP00000063775.1, ENSMMUT00000092282.1
    Conserved Domains (1) summary
    pfam15001
    Location:1 → 194
    AP-5_subunit_s1; AP-5 complex subunit sigma-1

  2. XM_015149383.2 → XP_015004869.1  AP-5 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZGM5, A0A8J8XMD8, G7N2V4, H9FWR2
    Conserved Domains (1) summary
    pfam15001
    Location:1 → 194
    AP-5_subunit_s1; AP-5 complex subunit sigma-1

  3. XM_015149381.2 → XP_015004867.1  AP-5 complex subunit sigma-1 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZGM5, A0A8J8XMD8, G7N2V4, H9FWR2
    Conserved Domains (1) summary
    pfam15001
    Location:1 → 194
    AP-5_subunit_s1; AP-5 complex subunit sigma-1
Nucleotide Protein
Heading Accession and Version

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