U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COL10A1 collagen type X alpha 1 chain [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716223, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
COL10A1provided by VGNC
Official Full Name
collagen type X alpha 1 chainprovided by VGNC
Primary source
VGNC:VGNC:104370
See related
Ensembl:ENSMMUG00000063074
Gene type
protein coding
RefSeq status
INFERRED
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COL10A1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (19699478..19706652, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (151692100..151699274)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene triosephosphate isomerase-like Neighboring gene fyn related Src family tyrosine kinase Neighboring gene 60S ribosome subunit biogenesis protein NIP7 homolog pseudogene Neighboring gene 5'-nucleotidase domain containing 1 Neighboring gene TSPY like 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
collagen alpha-1(X) chain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194546.1 → NP_001181475.1  collagen alpha-1(X) chain precursor

    See identical proteins and their annotated locations for NP_001181475.1

    Status: INFERRED

    Source sequence(s)
    QNVO02000336
    UniProtKB/TrEMBL
    A0A5F7ZDT9, G7MQP5
    Related
    ENSMMUP00000063345.1, ENSMMUT00000094305.1
    Conserved Domains (2) summary
    smart00110
    Location:545 → 680
    C1Q; Complement component C1q domain
    pfam01391
    Location:326 → 383
    Collagen; Collagen triple helix repeat (20 copies)

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    19699478..19706652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous