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GTF2H4 general transcription factor IIH subunit 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 714285, updated on 5-Mar-2024

Summary

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Official Symbol
GTF2H4provided by VGNC
Official Full Name
general transcription factor IIH subunit 4provided by VGNC
Primary source
VGNC:VGNC:73312
Locus tag
EGK_14685
See related
Ensembl:ENSMMUG00000018605
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (139007954..139013905, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (31600950..31606889)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene surfactant associated 2 Neighboring gene valyl-tRNA synthetase 2, mitochondrial Neighboring gene discoidin domain receptor tyrosine kinase 1 Neighboring gene uncharacterized LOC114677649

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 4
Names
ATP-binding cassette, sub-family F (GCN20), member 1
General transcription factor IIH polypeptide 4
general transcription factor IIH, polypeptide 4, 52kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001047142.1 → NP_001040607.1  general transcription factor IIH subunit 4

    See identical proteins and their annotated locations for NP_001040607.1

    Status: PROVISIONAL

    Source sequence(s)
    AB128049
    UniProtKB/TrEMBL
    A0A1D5Q0M1, A0A8J8YNV4, F6Y6M6, G7MRG6, Q5TM73
    Related
    ENSMMUP00000080485.1, ENSMMUT00000096750.1
    Conserved Domains (1) summary
    TIGR00625
    Location:18 → 460
    tfb2; Transcription factor tfb2

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    139007954..139013905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015135870.2 → XP_014991356.1  general transcription factor IIH subunit 4 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q0M1, A0A8J8YNV4, F6Y6M6, G7MRG6, Q5TM73
    Related
    ENSMMUP00000024483.4, ENSMMUT00000026161.4
    Conserved Domains (1) summary
    TIGR00625
    Location:18 → 460
    tfb2; Transcription factor tfb2

  2. XM_015135872.2 → XP_014991358.1  general transcription factor IIH subunit 4 isoform X2

    UniProtKB/TrEMBL
    A0A1D5Q0M1, A0A8J8YNV4, F6Y6M6, G7MRG6, Q5TM73
    Conserved Domains (1) summary
    TIGR00625
    Location:18 → 460
    tfb2; Transcription factor tfb2

  3. XM_015135869.2 → XP_014991355.1  general transcription factor IIH subunit 4 isoform X1

    UniProtKB/TrEMBL
    A0A1D5Q0M1
    Conserved Domains (1) summary
    TIGR00625
    Location:54 → 496
    tfb2; Transcription factor tfb2
Nucleotide Protein
Heading Accession and Version

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