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IFFO1 intermediate filament family orphan 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 712900, updated on 17-Aug-2024

Summary

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Official Symbol
IFFO1provided by VGNC
Official Full Name
intermediate filament family orphan 1provided by VGNC
Primary source
VGNC:VGNC:73439
See related
Ensembl:ENSMMUG00000018681
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (6691062..6707116, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (6777059..6793022, complement)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene small nucleolar RNA U85 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase Neighboring gene uncharacterized LOC107000737 Neighboring gene NOP2 nucleolar protein Neighboring gene chromodomain helicase DNA binding protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
intermediate filament family orphan 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    6691062..6707116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015150901.2 → XP_015006387.1  intermediate filament family orphan 1 isoform X7

    UniProtKB/TrEMBL
    F6ZXT7
    Conserved Domains (1) summary
    pfam00038
    Location:230 → 518
    Filament; Intermediate filament protein

  2. XM_015150900.2 → XP_015006386.1  intermediate filament family orphan 1 isoform X5

    UniProtKB/TrEMBL
    A0A5F8A7H7
    Related
    ENSMMUP00000073810.1, ENSMMUT00000099405.1
    Conserved Domains (1) summary
    pfam00038
    Location:230 → 519
    Filament; Intermediate filament protein

  3. XM_028829184.1 → XP_028685017.1  intermediate filament family orphan 1 isoform X4

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 520
    Filament; Intermediate filament protein

  4. XM_015150902.2 → XP_015006388.1  intermediate filament family orphan 1 isoform X8

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 521
    Filament; Intermediate filament protein

  5. XM_015150898.2 → XP_015006384.1  intermediate filament family orphan 1 isoform X2

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 521
    Filament; Intermediate filament protein

  6. XM_028829187.1 → XP_028685020.1  intermediate filament family orphan 1 isoform X9

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 521
    Filament; Intermediate filament protein

  7. XM_015150899.2 → XP_015006385.1  intermediate filament family orphan 1 isoform X3

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 521
    Filament; Intermediate filament protein

  8. XM_028829185.1 → XP_028685018.1  intermediate filament family orphan 1 isoform X6

    Conserved Domains (1) summary
    pfam00038
    Location:230 → 522
    Filament; Intermediate filament protein

  9. XM_015150897.2 → XP_015006383.1  intermediate filament family orphan 1 isoform X1

    UniProtKB/TrEMBL
    I0FG28
    Related
    ENSMMUP00000024587.2, ENSMMUT00000026266.3
    Conserved Domains (1) summary
    pfam00038
    Location:230 → 522
    Filament; Intermediate filament protein

  10. XM_028829189.1 → XP_028685022.1  intermediate filament family orphan 1 isoform X11

    Conserved Domains (2) summary
    TIGR00618
    Location:253 → 483
    sbcc; exonuclease SbcC
    pfam00038
    Location:230 → 360
    Filament; Intermediate filament protein

  11. XM_028829188.1 → XP_028685021.1  intermediate filament family orphan 1 isoform X10

    Conserved Domains (2) summary
    COG1196
    Location:230 → 508
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam00038
    Location:230 → 360
    Filament; Intermediate filament protein

RNA

  1. XR_003720498.1 RNA Sequence

  2. XR_003720497.1 RNA Sequence

    Related
    ENSMMUT00000026264.4
Nucleotide Protein
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