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RB1CC1 RB1 inducible coiled-coil 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 710330, updated on 17-Aug-2024

Summary

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Official Symbol
RB1CC1provided by VGNC
Official Full Name
RB1 inducible coiled-coil 1provided by VGNC
Primary source
VGNC:VGNC:76483
See related
Ensembl:ENSMMUG00000009990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
26
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (53224854..53321784, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (48861001..48958995)

Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene ALK and LTK ligand 1 Neighboring gene uncharacterized LOC106999762 Neighboring gene translation initiation factor IF-2 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene neuropeptides B and W receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RB1-inducible coiled-coil protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266144.1 → NP_001253073.1  RB1-inducible coiled-coil protein 1

    See identical proteins and their annotated locations for NP_001253073.1

    Status: PROVISIONAL

    Source sequence(s)
    JV527822
    UniProtKB/TrEMBL
    F6QUC5, H9EQW9, I2CTJ3
    Related
    ENSMMUP00000013071.4, ENSMMUT00000013953.4
    Conserved Domains (3) summary
    COG0419
    Location:843 → 1373
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam10377
    Location:1439 → 1588
    ATG11; Autophagy-related protein 11
    cd17060
    Location:2 → 76
    Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041761.1 Reference Mmul_10 Primary Assembly

    Range
    53224854..53321784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015145334.2 → XP_015000820.1  RB1-inducible coiled-coil protein 1 isoform X2

    UniProtKB/TrEMBL
    H9EQX0, I2CTJ4
    Related
    ENSMMUP00000057012.2, ENSMMUT00000055658.2
    Conserved Domains (6) summary
    COG1340
    Location:1000 → 1265
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam10377
    Location:1439 → 1585
    ATG11; Autophagy-related protein 11
    pfam15665
    Location:858 → 1047
    FAM184; Family with sequence similarity 184, A and B
    cl00155
    Location:3 → 77
    UBQ; Ubiquitin-like proteins
    cl02488
    Location:886 → 1059
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23765
    Location:1014 → 1119
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

  2. XM_028852257.1 → XP_028708090.1  RB1-inducible coiled-coil protein 1 isoform X1

    UniProtKB/TrEMBL
    F6QUC5, H9EQW9, I2CTJ3
    Related
    ENSMMUP00000071818.1, ENSMMUT00000097917.1
    Conserved Domains (3) summary
    COG0419
    Location:843 → 1373
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam10377
    Location:1439 → 1588
    ATG11; Autophagy-related protein 11
    cd17060
    Location:2 → 76
    Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins

  3. XM_015145335.2 → XP_015000821.1  RB1-inducible coiled-coil protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F8A4I4
    Conserved Domains (5) summary
    COG1340
    Location:1000 → 1265
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam15665
    Location:858 → 1047
    FAM184; Family with sequence similarity 184, A and B
    cl00155
    Location:3 → 77
    UBQ; Ubiquitin-like proteins
    cl02488
    Location:886 → 1059
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23765
    Location:1014 → 1119
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

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