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SJAG_01599 WD repeat protein [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7052286, updated on 17-May-2024

Summary

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Gene symbol
SJAG_01599
Gene description
WD repeat protein
Primary source
FungiDB:SJAG_01599
Locus tag
SJAG_01599
See related
VEuPathDB:SJAG_01599
Gene type
protein coding
RNA name
WD repeat protein
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_01599 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_011627862.1Genomic Context describing neighboring genes Neighboring gene hydroxyacylglutathione hydrolase Neighboring gene TIM23 translocase complex subunit Tim14 Neighboring gene HOPS complex subunit Vps16 Neighboring gene GTPase activating protein Neighboring gene chromodomain protein Swi6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627862.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of pericentric heterochromatin formation IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of siRNA-independent facultative heterochromatin formation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of DPS complex IEA
Inferred from Electronic Annotation
more info
  
part_of chromatin IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IEA
Inferred from Electronic Annotation
more info
  
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
WD repeat protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627862.1 Reference assembly

    Range
    1972421..1973799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002172814.2 → XP_002172850.1  WD repeat protein [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002172850.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JYD9
    Conserved Domains (3) summary
    COG2319
    Location:22 → 311
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:24 → 63
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:24 → 287
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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