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SJAG_00882 pescadillo-family BRCT domain-containing protein [ Schizosaccharomyces japonicus yFS275 ]

Gene ID: 7051974, updated on 17-May-2024

Summary

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Gene symbol
SJAG_00882
Gene description
pescadillo-family BRCT domain-containing protein
Primary source
FungiDB:SJAG_00882
Locus tag
SJAG_00882
See related
VEuPathDB:SJAG_00882
Gene type
protein coding
RNA name
pescadillo-family BRCT domain-containing protein
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces japonicus yFS275 (strain: yFS275)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SJAG_00882 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_011627860.1Genomic Context describing neighboring genes Neighboring gene MCM complex subunit Mcm7 Neighboring gene nucleolar protein Dnt1 Neighboring gene aspartate kinase Neighboring gene inositol polyphosphate phosphatase Neighboring gene U3 snoRNP protein Utp4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011627860.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by JaponicusDB

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in assembly of large subunit precursor of preribosome IEA
Inferred from Electronic Annotation
more info
  
involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
  
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
  
part_of nucleolar preribosome IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
pescadillo-family BRCT domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_011627860.1 Reference assembly

    Range
    2450268..2452552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002172115.2 → XP_002172151.1  pescadillo-family BRCT domain-containing protein [Schizosaccharomyces japonicus yFS275]

    See identical proteins and their annotated locations for XP_002172151.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6JWV7
    Conserved Domains (3) summary
    COG5163
    Location:2 → 610
    NOP7; Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
    pfam06732
    Location:8 → 276
    Pescadillo_N; Pescadillo N-terminus
    pfam16589
    Location:354 → 440
    BRCT_2; BRCT domain, a BRCA1 C-terminus domain
Nucleotide Protein
Heading Accession and Version

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