IFT140 intraflagellar transport 140 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: IFT140provided by VGNC
Official Full Name: intraflagellar transport 140provided by VGNC
Primary source: VGNC:VGNC:73456
See related: Ensembl:ENSMMUG00000000044
Gene type: protein coding
RefSeq status: MODEL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 33

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	20	NC_041773.1 (1531972..1637703, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	20	NC_027912.1 (1502393..1608105, complement)

Chromosome 20 - NC_041773.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in intraciliary retrograde transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axoneme	IEA Inferred from Electronic Annotation more info	PubMed
located_in ciliary basal body	IEA Inferred from Electronic Annotation more info	PubMed
part_of intraciliary transport particle A	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: intraflagellar transport protein 140 homolog

Names: intraflagellar transport 140 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041773.1 Reference Mmul_10 Primary Assembly

Range

1531972..1637703 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_015125280.2 → XP_014980766.2 intraflagellar transport protein 140 homolog isoform X1

UniProtKB/TrEMBL

F6Q6W1, G7NQS5, H9ZFU0

Related

ENSMMUP00000004845.4, ENSMMUT00000005142.4

Conserved Domains (5) summary

COG2319
Location:102 → 434

WD40; WD40 repeat [General function prediction only]

TIGR02917
Location:833 → 1233

PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein

sd00006
Location:803 → 837

TPR; TPR repeat [structural motif]

sd00039
Location:18 → 55

7WD40; WD40 repeat [structural motif]

cl29593
Location:15 → 167

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_028840989.1 → XP_028696822.1 intraflagellar transport protein 140 homolog isoform X1

UniProtKB/TrEMBL

F6Q6W1, G7NQS5, H9ZFU0

Conserved Domains (5) summary

COG2319
Location:102 → 434

WD40; WD40 repeat [General function prediction only]

TIGR02917
Location:833 → 1233

PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein

sd00006
Location:803 → 837

TPR; TPR repeat [structural motif]

sd00039
Location:18 → 55

7WD40; WD40 repeat [structural motif]

cl29593
Location:15 → 167

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_028840990.1 → XP_028696823.1 intraflagellar transport protein 140 homolog isoform X2

UniProtKB/TrEMBL

G7NQS5, H9ZFU0

Conserved Domains (5) summary

COG2319
Location:102 → 434

WD40; WD40 repeat [General function prediction only]

TIGR02917
Location:833 → 1233

PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein

sd00006
Location:803 → 837

TPR; TPR repeat [structural motif]

sd00039
Location:18 → 55

7WD40; WD40 repeat [structural motif]

cl29593
Location:15 → 167

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
XM_015125281.2 → XP_014980767.2 intraflagellar transport protein 140 homolog isoform X3

UniProtKB/TrEMBL

H9ZFU0

Conserved Domains (5) summary

COG0457
Location:833 → 1038

TPR; Tetratricopeptide (TPR) repeat [General function prediction only]

COG2319
Location:102 → 434

WD40; WD40 repeat [General function prediction only]

sd00006
Location:803 → 837

TPR; TPR repeat [structural motif]

sd00039
Location:18 → 55

7WD40; WD40 repeat [structural motif]

cl29593
Location:15 → 167

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...