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LOC6903263 histone acetyltransferase Tip60 [ Drosophila pseudoobscura ]

Gene ID: 6903263, updated on 25-Jan-2024

Summary

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Gene symbol
LOC6903263
Gene description
histone acetyltransferase Tip60
See related
EnsemblRapid:LOC6903263
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 4 NC_046681.1 (29423204..29424892, complement)

Chromosome 4 - NC_046681.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6903264 Neighboring gene 40S ribosomal protein S14a Neighboring gene transcription initiation factor TFIID subunit 7 Neighboring gene uncharacterized LOC6903265 Neighboring gene proteasome activator complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046681.1 Chromosome 4 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase Tip60

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046681.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    29423204..29424892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033380427.1 → XP_033236318.1  histone acetyltransferase Tip60 isoform X4

    UniProtKB/TrEMBL
    A0A6I8VZ95
    Related
    XP_033236318.1, XM_033380427.1
    Conserved Domains (2) summary
    PLN00104
    Location:49 → 388
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:16 → 71
    Tudor-knot; RNA binding activity-knot of a chromodomain

  2. XM_002132926.3 → XP_002132962.3  histone acetyltransferase Tip60 isoform X5

    UniProtKB/TrEMBL
    A0A6I8UXU2
    Related
    XP_002132962.3, XM_002132926.3
    Conserved Domains (1) summary
    PLN00104
    Location:24 → 363
    PLN00104; MYST -like histone acetyltransferase; Provisional

  3. XM_015180991.2 → XP_015036477.2  histone acetyltransferase Tip60 isoform X2

    UniProtKB/TrEMBL
    A0A6I8V984
    Related
    XP_015036477.2, XM_015180991.2
    Conserved Domains (2) summary
    PLN00104
    Location:44 → 383
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:11 → 66
    Tudor-knot; RNA binding activity-knot of a chromodomain

  4. XM_033380425.1 → XP_033236316.1  histone acetyltransferase Tip60 isoform X1

    UniProtKB/TrEMBL
    A0A6I8VYZ3
    Related
    XP_033236316.1, XM_033380425.1
    Conserved Domains (2) summary
    PLN00104
    Location:47 → 386
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:14 → 69
    Tudor-knot; RNA binding activity-knot of a chromodomain

  5. XM_033380426.1 → XP_033236317.1  histone acetyltransferase Tip60 isoform X3

    UniProtKB/TrEMBL
    A0A6I8VZ28
    Related
    XP_033236317.1, XM_033380426.1
    Conserved Domains (2) summary
    PLN00104
    Location:49 → 371
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:16 → 71
    Tudor-knot; RNA binding activity-knot of a chromodomain
Nucleotide Protein Strain
Heading Accession and Version

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