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LOC6902089 pre-rRNA-processing protein esf1 [ Drosophila pseudoobscura ]

Gene ID: 6902089, updated on 10-May-2024

Summary

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Gene symbol
LOC6902089
Gene description
pre-rRNA-processing protein esf1
See related
EnsemblRapid:LOC6902089
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC6902089 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (40254459..40256973)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene tetraspanin-2A Neighboring gene mitochondrial poly(A) polymerase Neighboring gene solute carrier family 12 member 8 Neighboring gene aurora kinase A Neighboring gene histidine-rich glycoprotein Neighboring gene sex-lethal homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-rRNA-processing protein esf1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    40254459..40256973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002133584.3 → XP_002133620.1  pre-rRNA-processing protein esf1

    See identical proteins and their annotated locations for XP_002133620.1

    UniProtKB/TrEMBL
    A0A6I8UYT0, B5DL48
    Related
    XP_002133620.1, XM_002133584.3
    Conserved Domains (2) summary
    COG5638
    Location:44 → 783
    COG5638; Uncharacterized conserved protein [Function unknown]
    pfam08159
    Location:700 → 728
    NUC153; NUC153 domain
Nucleotide Protein Strain
Heading Accession and Version

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