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LOC6898403 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 [ Drosophila pseudoobscura ]

Gene ID: 6898403, updated on 4-Apr-2023

Summary

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Gene symbol
LOC6898403
Gene description
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
See related
EnsemblRapid:LOC6898403
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
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Genomic context

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See LOC6898403 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (10589546..10591705, complement)

Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene prenyl protease type I Neighboring gene uncharacterized LOC6898402 Neighboring gene uncharacterized LOC117183605 Neighboring gene putative uncharacterized protein DDB_G0282133

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    10589546..10591705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015184188.2 → XP_015039674.2  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X2

    UniProtKB/TrEMBL
    A0A6I8VEP1
    Related
    XP_015039674.2, XM_015184188.2
    Conserved Domains (1) summary
    cd00038
    Location:1 → 73
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_002138413.3 → XP_002138449.3  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1

    UniProtKB/TrEMBL
    A0A6I8V469
    Related
    XP_002138449.3, XM_002138413.3
    Conserved Domains (1) summary
    cd00038
    Location:1 → 73
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein Strain
Heading Accession and Version

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