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Nxpe5 neurexophilin and PC-esterase domain family, member 5 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680711, updated on 17-Aug-2024

Summary

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Symbol
Nxpe5provided by RGD
Full Name
neurexophilin and PC-esterase domain family, member 5provided by RGD
Primary source
RGD:1588255
See related
EnsemblRapid:ENSRNOG00000068266 AllianceGenome:RGD:1588255
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Nxpe4
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Lung (RPKM 22.3), Heart (RPKM 18.8) and 9 other tissues See more
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Genomic context

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Location:
12q11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (22211253..22233324, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (17097624..17119700, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (19428950..19440791, complement)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene canopy FGF signaling regulator 4 Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene neurexophilin and PC-esterase domain family, member 5 like 2 Neighboring gene prothymosin alpha like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
NXPE family member 3-like
Names
neurexophilin and PC-esterase domain family, member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    22211253..22233324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039089975.1 → XP_038945903.1  NXPE family member 3-like

    UniProtKB/TrEMBL
    A0A8I5ZVS1, A0A8I6ALQ8
    Related
    ENSRNOP00000082717.1, ENSRNOT00000110337.2
    Conserved Domains (1) summary
    pfam06312
    Location:121 → 261
    Neurexophilin
Nucleotide Protein Strain
Heading Accession and Version

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