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TRIADDRAFT_25346 uncharacterized protein [ Trichoplax adhaerens ]

Gene ID: 6753696, updated on 17-Feb-2024

Summary

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Gene symbol
TRIADDRAFT_25346
Gene description
uncharacterized protein
Locus tag
TRIADDRAFT_25346
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichoplax adhaerens (strain: Grell-BS-1999)
Lineage
Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax
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Genomic context

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See TRIADDRAFT_25346 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_002060947.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002060947.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Trichoplax genome and the nature of placozoans. Srivastava M, et al. Nature, 2008 Aug 21. PMID 18719581

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002112483.1
  • similar to butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002060947.1 Reference assembly

    Range
    4188080..4191197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002112447.1 → XP_002112483.1  uncharacterized protein TRIADDRAFT_25346 [Trichoplax adhaerens]

    See identical proteins and their annotated locations for XP_002112483.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B3RYG1
    Conserved Domains (3) summary
    cd00250
    Location:157 → 416
    CAS_like; Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases ...
    TIGR02409
    Location:54 → 426
    carnitine_bodg; gamma-butyrobetaine hydroxylase
    pfam06155
    Location:50 → 136
    DUF971; Protein of unknown function (DUF971)
Nucleotide Protein
Heading Accession and Version

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Research Materials