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LOC6740222 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [ Drosophila simulans ]

Gene ID: 6740222, updated on 10-May-2024

Summary

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Gene symbol
LOC6740222
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Locus tag
Dsimw501_GD24465
See related
EnsemblRapid:LOC6740222
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD24465; GD24465-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6740222 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) X NC_052525.2 (18588875..18590710, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) X NC_052525.1 (18588897..18590698, complement)

Chromosome X - NC_052525.2Genomic Context describing neighboring genes Neighboring gene mechanosensory protein 2-like Neighboring gene uncharacterized LOC27206569 Neighboring gene cilia- and flagella-associated protein 251-like Neighboring gene Rho GTPase activating protein at 18B Neighboring gene Odorant-binding protein 18a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Names
Dsim\GD24465
Dsim\GD24465-PA
dsim_GLEANR_8235

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052525.2 Reference Prin_Dsim_3.1

    Range
    18588875..18590710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002077067.4 → XP_002077103.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

    See identical proteins and their annotated locations for XP_002077103.1

    UniProtKB/TrEMBL
    B4NUQ0
    Related
    XP_002077103.1, XM_002077067.4
    Conserved Domains (1) summary
    cl21608
    Location:103 → 270
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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