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LOC6735938 gastrulation defective protein 1 homolog [ Drosophila simulans ]

Gene ID: 6735938, updated on 10-May-2024

Summary

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Gene symbol
LOC6735938
Gene description
gastrulation defective protein 1 homolog
Locus tag
Dsimw501_GD11798
See related
EnsemblRapid:LOC6735938
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD11798; GD11798-PA
Orthologs
fruit fly all
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Genomic context

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See LOC6735938 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 2R NC_052521.2 (20950619..20952775)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 2R NC_052521.1 (20950630..20952787)

Chromosome 2R - NC_052521.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6735935 Neighboring gene receptor expression-enhancing protein 2 Neighboring gene structure specific recognition protein Neighboring gene facilitated trehalose transporter Tret1-2 homolog Neighboring gene NTF2-related export protein 1 Neighboring gene sodium- and chloride-dependent glycine transporter 1 Neighboring gene uncharacterized LOC6735941

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA double-strand break processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gastrulation defective protein 1 homolog
Names
Dsim\GD11798
Dsim\GD11798-PA
dsim_GLEANR_11752

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052521.2 Reference Prin_Dsim_3.1

    Range
    20950619..20952775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002082812.4 → XP_002082848.1  gastrulation defective protein 1 homolog

    See identical proteins and their annotated locations for XP_002082848.1

    UniProtKB/TrEMBL
    B4QAZ6
    Related
    XP_002082848.1, XM_002082812.4
    Conserved Domains (3) summary
    COG2319
    Location:165 → 516
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:182 → 224
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:177 → 494
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials