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BBS4 Bardet-Biedl syndrome 4 [ Drosophila simulans ]

Gene ID: 6733932, updated on 22-May-2024

Summary

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Gene symbol
BBS4
Gene description
Bardet-Biedl syndrome 4
Locus tag
Dsimw501_GD10768
See related
EnsemblRapid:LOC6733932
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD10768; GD10768-PA
Orthologs
fruit fly all
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Genomic context

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See BBS4 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 2R NC_052521.2 (8441751..8446203)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 2R NC_052521.1 (8441728..8446177)

Chromosome 2R - NC_052521.2Genomic Context describing neighboring genes Neighboring gene probable cytochrome P450 12d1 proximal, mitochondrial Neighboring gene probable cytochrome P450 12d1 proximal, mitochondrial Neighboring gene G-protein coupled receptor dmsr-1 Neighboring gene uncharacterized LOC6733934 Neighboring gene zinc finger protein 316

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 4 protein homolog
Names
Dsim\GD10768
Dsim\GD10768-PA
dsim_GLEANR_10744

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052521.2 Reference Prin_Dsim_3.1

    Range
    8441751..8446203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002080940.4 → XP_002080976.2  Bardet-Biedl syndrome 4 protein homolog

    UniProtKB/TrEMBL
    A0A0J9TYP2, B4QB28
    Related
    XP_002080976.2, XM_002080940.4
    Conserved Domains (4) summary
    sd00006
    Location:283 → 311
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:283 → 348
    TPR_11; TPR repeat
    pfam13424
    Location:97 → 175
    TPR_12; Tetratricopeptide repeat
    pfam14559
    Location:190 → 254
    TPR_19; Tetratricopeptide repeat
Nucleotide Protein Strain
Heading Accession and Version

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