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beta'COP coatomer subunit beta' [ Drosophila simulans ]

Gene ID: 6732203, updated on 24-May-2024

Summary

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Gene symbol
beta'COP
Gene description
coatomer subunit beta'
Locus tag
Dsimw501_GD23895
See related
EnsemblRapid:LOC6732203
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD23895; GD23895-PA
Orthologs
fruit fly all
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Genomic context

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See beta'COP in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 2L NC_052520.2 (13222319..13225836)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 2L NC_052520.1 (13222321..13225833)

Chromosome 2L - NC_052520.2Genomic Context describing neighboring genes Neighboring gene stAR-related lipid transfer protein 7, mitochondrial Neighboring gene protein disulfide-isomerase A5 Neighboring gene interferon-inducible double-stranded RNA-dependent protein kinase activator A homolog Neighboring gene inhibitor of growth protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit beta'
Names
Dsim\GD23895
Dsim\GD23895-PA
dsim_GLEANR_7625

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052520.2 Reference Prin_Dsim_3.1

    Range
    13222319..13225836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002079296.4 → XP_002079332.2  coatomer subunit beta'

    UniProtKB/TrEMBL
    A0A0J9R1Y4, B4Q4S9
    Related
    XP_002079332.2, XM_002079296.4
    Conserved Domains (4) summary
    COG2319
    Location:8 → 378
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:8 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam04053
    Location:321 → 765
    Coatomer_WDAD; Coatomer WD associated region
    sd00039
    Location:103 → 140
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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