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SPARC secreted protein, acidic, cysteine-rich [ Drosophila simulans ]

Gene ID: 6729787, updated on 22-May-2024

Summary

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Gene symbol
SPARC
Gene description
secreted protein, acidic, cysteine-rich
Locus tag
Dsimw501_GD18115
See related
EnsemblRapid:LOC6729787
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila simulans
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GD18115; GD18115-PA
Orthologs
fruit fly all
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Genomic context

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See SPARC in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Prin_Dsim_3.1 (GCF_016746395.2) 3R NC_052523.2 (23068553..23071386, complement)
102 previous assembly Prin_Dsim_3.0 (GCF_016746395.1) 3R NC_052523.1 (23068608..23071422, complement)

Chromosome 3R - NC_052523.2Genomic Context describing neighboring genes Neighboring gene nucleosomal histone kinase 1 Neighboring gene histone H2A.v Neighboring gene Ribonuclear protein at 97D Neighboring gene male sterile (3) K81 Neighboring gene oxidoreductase-like domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPARC
Names
Dsim\GD18115
Dsim\GD18115-PA
dsim_GLEANR_1944

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila simulans Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dsim_3.1

Genomic

  1. NC_052523.2 Reference Prin_Dsim_3.1

    Range
    23068553..23071386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016174619.3 → XP_016036475.1  SPARC

    UniProtKB/TrEMBL
    B4QWS8
    Related
    XP_016036475.1, XM_016174619.3
    Conserved Domains (3) summary
    cd00252
    Location:165 → 287
    SPARC_EC; SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate ...
    cd01328
    Location:79 → 163
    FSL_SPARC; Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins ...
    pfam10591
    Location:164 → 273
    SPARC_Ca_bdg; Secreted protein acidic and rich in cysteine Ca binding region
Nucleotide Protein Strain
Heading Accession and Version

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