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ClpX Caseinolytic protease chaperone subunit [ Drosophila willistoni ]

Gene ID: 6649746, updated on 24-May-2024

Summary

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Gene symbol
ClpX
Gene description
Caseinolytic protease chaperone subunit
Locus tag
Dwil_GK22807
See related
EnsemblRapid:LOC6649746
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4538; GK22807; GK22807-PA
Orthologs
fruit fly all
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Genomic context

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See ClpX in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
6
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 3R NC_061086.1 (33202451..33206960)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032872.1 (4084035..4088696)

Chromosome 3R - NC_061086.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein at 92B Neighboring gene Surfeit locus protein 6 Neighboring gene serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha Neighboring gene neither inactivation nor afterpotential E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome. Bergman CM, et al. Genome Biol, 2002. PMID 12537575, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
Names
Dwil\CG4538
Dwil\GK22807
Dwil\GK22807-PA
dwil_GLEANR_6010

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NC_061086.1 Reference UCI_dwil_1.1

    Range
    33202451..33206960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002072331.4 → XP_002072367.2  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

    UniProtKB/TrEMBL
    B4NGD6
    Related
    XP_002072367.2, XM_002072331.4
    Conserved Domains (1) summary
    PRK05342
    Location:142 → 652
    clpX; ATP-dependent protease ATP-binding subunit ClpX; Provisional
Nucleotide Protein
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