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Smu1 Smu1 spliceosomal factor [ Drosophila willistoni ]

Gene ID: 6649655, updated on 24-May-2024

Summary

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Gene symbol
Smu1
Gene description
Smu1 spliceosomal factor
Locus tag
Dwil_GK22433
See related
EnsemblRapid:LOC6649655
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK22433; GK22433-PA
Orthologs
fruit fly all
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Genomic context

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See Smu1 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
5
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 3R NC_061086.1 (32191511..32193500, complement)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032872.1 (3072936..3074916, complement)

Chromosome 3R - NC_061086.1Genomic Context describing neighboring genes Neighboring gene tolloid-like protein 2 Neighboring gene uncharacterized LOC26529122 Neighboring gene uncharacterized LOC6649654 Neighboring gene phosphatidylinositide phosphatase SAC2 Neighboring gene BTB/POZ domain-containing protein 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD40 repeat-containing protein SMU1
Names
Dwil\GK22433
Dwil\GK22433-PA
dwil_GLEANR_5650

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NC_061086.1 Reference UCI_dwil_1.1

    Range
    32191511..32193500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002072206.3 → XP_002072242.1  WD40 repeat-containing protein SMU1

    See identical proteins and their annotated locations for XP_002072242.1

    UniProtKB/TrEMBL
    B4NG11
    Related
    XP_002072242.1, XM_002072206.3
    Conserved Domains (5) summary
    smart00667
    Location:5 → 38
    LisH; Lissencephaly type-1-like homology motif
    smart00668
    Location:40 → 90
    CTLH; C-terminal to LisH motif
    COG2319
    Location:212 → 509
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:214 → 508
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:218 → 256
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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