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LOC664311 flavin reductase (NADPH) [ Tribolium castaneum (red flour beetle) ]

Gene ID: 664311, updated on 10-May-2024

Summary

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Gene symbol
LOC664311
Gene description
flavin reductase (NADPH)
Locus tag
TcasGA2_TC009981
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See LOC664311 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (14002876..14004850)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (10735108..10736289, complement)

Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene PNGase-like Neighboring gene putative gustatory receptor 28b Neighboring gene putative gustatory receptor 28b Neighboring gene N(alpha)-acetyltransferase 80 Neighboring gene FK506-binding protein-like Neighboring gene Mediator complex subunit 6 Neighboring gene retinol dehydrogenase 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biliverdin reductase (NAD(P)H) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables riboflavin reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flavin reductase (NADPH)
Names
AUGUSTUS-3.0.2_09981
Flavin reductase (NADPH)-like Protein
GLEAN_09981

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

    Range
    14002876..14004850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_970318.5 → XP_975411.1  flavin reductase (NADPH)

    See identical proteins and their annotated locations for XP_975411.1

    UniProtKB/TrEMBL
    D6WR30
    Conserved Domains (2) summary
    cd05244
    Location:3 → 197
    BVR-B_like_SDR_a; biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs
    COG0702
    Location:3 → 194
    YbjT; Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [General function prediction only]
Nucleotide Protein Strain
Heading Accession and Version

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