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pdm2 POU domain protein 2 [ Drosophila willistoni ]

Gene ID: 6642018, updated on 24-May-2024

Summary

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Gene symbol
pdm2
Gene description
POU domain protein 2
Locus tag
Dwil_GK15506
See related
EnsemblRapid:LOC6642018
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK15506; GK15507; GK15506-PB; GK15507-PA
Orthologs
fruit fly all
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Genomic context

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See pdm2 in Genome Data Viewer
Location:
chromosome: 2R
Exon count:
5
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 2R Unlocalized Scaffold NW_025814050.1 (20812791..20844174)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032478.1 (10517413..10548628)

NW_025814050.1Genomic Context describing neighboring genes Neighboring gene protein nubbin Neighboring gene uncharacterized LOC111518592 Neighboring gene endothelin-converting enzyme homolog Neighboring gene fibrinogen-like protein 1 Neighboring gene chaperonin containing TCP1 subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain protein 2
Names
Dwil\GK15506
Dwil\GK15506-PB
Dwil\GK15507
Dwil\GK15507-PA
dwil_GLEANR_15752
dwil_GLEANR_15753

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NW_025814050.1 Reference UCI_dwil_1.1

    Range
    20812791..20844174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023175819.2 → XP_023031587.1  POU domain protein 2 isoform X1

    Related
    XP_023031587.1, XM_023175819.2
    Conserved Domains (2) summary
    smart00352
    Location:741 → 805
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:839 → 892
    Homeobox; Homeobox domain

  2. XM_002065503.4 → XP_002065539.1  POU domain protein 2 isoform X2

    See identical proteins and their annotated locations for XP_002065539.1

    UniProtKB/TrEMBL
    B4MWN6
    Related
    XP_002065539.1, XM_002065503.4
    Conserved Domains (2) summary
    smart00352
    Location:319 → 383
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:417 → 470
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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