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mRpL20 mitochondrial ribosomal protein L20 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 664085, updated on 10-May-2024

Summary

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Gene symbol
mRpL20
Gene description
mitochondrial ribosomal protein L20
Locus tag
TcasGA2_TC013079
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See mRpL20 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 5 NC_087398.1 (1412501..1413254)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG5 NC_007420.3 (14281356..14282060, complement)

Chromosome 5 - NC_087398.1Genomic Context describing neighboring genes Neighboring gene isoprenylcysteine carboxylmethyltransferase ste14 Neighboring gene Activated Cdc42 kinase-like Neighboring gene transcription factor HES-1 Neighboring gene 10 kDa heat shock protein, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein bL20
Names
39S ribosomal protein L20, mitochondrial
50S ribosomal protein L20
GLEAN_13079

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087398.1 Reference icTriCast1.1 Primary Assembly

    Range
    1412501..1413254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_970102.4 → XP_975195.1  large ribosomal subunit protein bL20

    See identical proteins and their annotated locations for XP_975195.1

    UniProtKB/TrEMBL
    D6WJ74
    Conserved Domains (1) summary
    pfam00453
    Location:13 → 113
    Ribosomal_L20; Ribosomal protein L20
Nucleotide Protein Strain
Heading Accession and Version

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