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Rpt2 26S proteasome regulatory subunit Rpt2 [ Tribolium castaneum (red flour beetle) ]

Gene ID: 663731, updated on 16-May-2024

Summary

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Gene symbol
Rpt2
Gene description
26S proteasome regulatory subunit Rpt2
Locus tag
TcasGA2_TC009675
Gene type
protein coding
RefSeq status
MODEL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Orthologs
fruit fly all
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Genomic context

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See Rpt2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 3 NC_087396.1 (20925280..20927051, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG7 NC_007422.5 (3841699..3843432)

Chromosome 3 - NC_087396.1Genomic Context describing neighboring genes Neighboring gene UDP-glucosyltransferase 2-like Neighboring gene uncharacterized LOC661866 Neighboring gene Neurexin 1 Neighboring gene KICSTOR complex protein kaptin Neighboring gene peroxynitrite isomerase THAP4 Neighboring gene Leucine-rich repeat 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
  2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome regulatory subunit 4
Names
26S protease regulatory subunit 4
26S protease regulatory subunit 4-like Protein
AUGUSTUS-3.0.2_09675
GLEAN_09675
Regulatory particle triple-A ATPase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087396.1 Reference icTriCast1.1 Primary Assembly

    Range
    20925280..20927051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_969766.5 → XP_974859.1  26S proteasome regulatory subunit 4

    See identical proteins and their annotated locations for XP_974859.1

    UniProtKB/TrEMBL
    D6WTT2
    Conserved Domains (1) summary
    PTZ00361
    Location:23 → 438
    PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
Nucleotide Protein Strain
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