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Prosalpha4 proteasome alpha4 subunit [ Drosophila virilis ]

Gene ID: 6636671, updated on 22-May-2024

Summary

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Gene symbol
Prosalpha4
Gene description
proteasome alpha4 subunit
Locus tag
Dvir_GJ18504
See related
EnsemblRapid:LOC6636671
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila virilis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
alpha4; GJ18504; Pros28.1; alpha4_dv; GJ18504-PA
Orthologs
fruit fly all
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Genomic context

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See Prosalpha4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587575.1 (10961383..10962436)

NW_022587575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6636674 Neighboring gene katanin p80 WD40 repeat-containing subunit B1 Neighboring gene peroxisomal multifunctional enzyme type 2 Neighboring gene ethanolamine kinase 1 Neighboring gene vesicle transport protein GOT1B Neighboring gene cytochrome b-c1 complex subunit 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022587575 Unplaced Scaffold Reference DvirRS2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary conservation of a testes-specific proteasome subunit gene in Drosophila. Belote JM, et al. Gene, 1998 Jul 17. PMID 9666090
  2. Rapid evolution through gene duplication and subfunctionalization of the testes-specific alpha4 proteasome subunits in Drosophila. Torgerson DG, et al. Genetics, 2004 Nov. PMID 15579695, Free PMC Article
  3. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-7-1
Names
Dvir\GJ18504
Dvir\GJ18504-PA
Dvir\Pros28.1
Dvir\Pros28.1-PA
Pros28.1-PA
dvir_GLEANR_3305

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DvirRS2

Genomic

  1. NW_022587575.1 Reference DvirRS2

    Range
    10961383..10962436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002060113.3 → XP_002060149.1  proteasome subunit alpha type-7-1

    See identical proteins and their annotated locations for XP_002060149.1

    UniProtKB/Swiss-Prot
    O16811
    UniProtKB/TrEMBL
    B4MG96
    Related
    XP_002060149.1, XM_002060113.3
    Conserved Domains (1) summary
    cd03755
    Location:5 → 213
    proteasome_alpha_type_7; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
Nucleotide Protein Strain
Heading Accession and Version

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